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In the era of targeted therapy, the assessment and evaluation of solid tumors in pathology is becoming more and more based
on a combination of the histopathology and the molecular analysis of tumor tissues or liquid biopsy. In addition, the choice of
treatment protocols is increasingly based on the molecular features of the tumor as a consequence of the rapid development of
new cancer treatments that specifically target aberrant proteins present in tumor cells. Not only the number of patients eligible
for targeted precision medicine, but also the number of molecular targets per patient and tumor type is rising. Therefore,
diagnostic molecular pathology has attained much attention in the last few years. It is of utmost importance to determine the
relevant molecular aberrations present in tumors for diagnostic, prognostic or predictive purposes. However, this is faced with
several challenges. First, the molecular pathology lab has to meet the challenge of doing the required molecular tests using the
limited amount of tumor tissues embedded in paraffin after formalin fixation in short turnaround time. Second, the choice of
the detection method is critical, since the analytical methods should provide accurate, reliable and cost-effective results. Third,
the validation of the test procedures and results is essential. In addition, participation and good performance in internal (IQA)
and external quality assurance (EQA) schemes is mandatory. However, in spite of all these obstacles, molecular pathology is
increasingly becoming an integral part of the diagnostic workup of most solid tumors, as well as, in determining prognosis and
response to treatment. The list of molecular tests for breast, lung, colon, stomach, bone and soft tissue tumors are continuously
increasing.