ISSN: 2155-952X

Journal of Biotechnology & Biomaterials
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  • Research Article   
  • J Biotechnol Biomater 2018, Vol 8(4): 286
  • DOI: 10.4172/2155-952X.1000286

Analysis of the Molecular Diversity of Common Bacterial Blight (Xanthomonas campestris pv. phaseoli and X. campestris pv. phaseoli var. fuscansi) Strains from Ethiopia Revealed by Rep-PCR Genomic Fingerprinting

Rezene Y1*, Mitiku M1, Tesfaye K2, Male A3 and Gepts P4
1Southern Agricultural Research Institute, Molecular Biotechnology Lab, Awassa, Ethiopia
2Ethiopian Biotechnology Institute, Addis Ababa, Ethiopia
3International Center for Tropical Agriculture (CIAT), Kampala, Uganda
4Department of Plant Sciences, University of California, California, United States of America
*Corresponding Author : Rezene Y, Southern Agricultural Research Institute, Molecular Biotechnology Lab, Awassa, Ethiopia, Email: rezene77@gmail.com

Received Date: Oct 09, 2018 / Accepted Date: Nov 24, 2018 / Published Date: Nov 27, 2018

Abstract

Common bacterial blight (CBB) disease of the common bean (Phaseolus vulgaris) caused by Xanthomonas campestris pv. phaseoli and X. campestris pv. phaseoli var. fuscans, is one of the most damaging foliar diseases of common bean production in Ethiopia. CBB causes economic losses due to reduction in seed quality and yield in common bean producing regions of Ethiopia. Currently, information on the genetic diversity of CBB strains in Ethiopia has been lacking. Here, for this specific study common bean bacterial blight strains were obtained from infected leaves collected from diverse bean growing areas. The collected strains of CBB were characterized to study the genetic diversity and relatedness of the CBB strains using repetitive extragenic elements polymerase chain reaction (rep-PCR) genomic fingerprinting technique. Analysis of Molecular Variance (AMOVA) revealed the existence of genetic diversity among bacterial strains and confirmed the presence of genetically distinct strains in Ethiopia. CBB pathogens are seed-borne so the lack of geographic differentiation among the six-different common bean growing localities could be the result of the distribution of one or some limited bacterial genotypes. Common bean improvement programs that develop CBB-resistant bean varieties for higher production should consider this information to determine the relevance and extent of resistance of improved bean cultivars.

Keywords: Rep-PCR fingerprinting; Genetic diversity; Common bacterial blight, Disease resistance

Citation: Rezene Y, Mitiku M, Tesfaye K, Male A, Gepts P (2018) Analysis of the Molecular Diversity of Common Bacterial Blight (Xanthomonas campestris pv. phaseoli and X. campestris pv. phaseoli var. fuscans) Strains from Ethiopia Revealed by Rep-PCR Genomic Fingerprinting. J Biotechnol Biomater 8:286. Doi: 10.4172/2155-952X.1000286

Copyright: © 2018 Rezene Y, et al. This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited

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