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	<front>
				<journal-meta>
			<journal-id journal-id-type="nlm-ta">OMICS Publishing Group</journal-id>
			<journal-id journal-id-type="publisher-id">opg</journal-id>
            <journal-title>Journal of Proteomics &amp; Bioinformatics</journal-title>
			<issn pub-type="epub">0974-276X</issn>
			<publisher>
				<publisher-name>OMICS Publishing Group</publisher-name>
				<publisher-loc>India, USA</publisher-loc>
			</publisher>
		</journal-meta>
		<article-meta>
		<article-id pub-id-type="publisher-id">000063</article-id>
		<article-categories>
				<subj-group subj-group-type="heading">
					<subject>Abstract</subject>
				</subj-group>
				<subj-group subj-group-type="Discipline">
					<subject>Biochemistry</subject>
				</subj-group>
				<subj-group subj-group-type="System Taxonomy">
					<subject>Proteomics</subject>
					<subject>Bioinformatics</subject>
					<subject>Genomics</subject>
					<subject>Transcriptomics</subject>
					<subject>Biomarkers</subject>
				</subj-group>
			</article-categories>
			<title-group>
				<article-title>Identity of Proteins Extracted from Worn Silicone Hydrogel Contact Lenses</article-title>
			</title-group>
			<contrib-group>
				<contrib contrib-type="author">
					<name>
						<surname>Zhao</surname>
						<given-names>Z.</given-names>
					</name>
					<xref ref-type="aff" rid="a1">1</xref>
					<xref ref-type="aff" rid="a2">2</xref>
				</contrib>
				<contrib contrib-type="author">
					<name>
						<surname> Carnt</surname>
						<given-names>N. A.</given-names>
					</name>
					<xref ref-type="aff" rid="a1">1</xref>
				</contrib>
				<contrib contrib-type="author">
					<name>
						<surname>Aliwarga</surname>
						<given-names>Y.</given-names>
					</name>
					<xref ref-type="aff" rid="a1">1</xref>
				</contrib>
				<contrib contrib-type="author">
					<name>
						<surname>Wei</surname>
						<given-names>X.</given-names>
					</name>
					<xref ref-type="aff" rid="a1">1</xref>
				</contrib>
				<contrib contrib-type="author">
					<name>
						<surname> Willcox</surname>
						<given-names>M. D. P.</given-names>
					</name>
					<xref ref-type="aff" rid="a1">1</xref>
					<xref ref-type="aff" rid="a2">2</xref>
				</contrib>												
			</contrib-group>
			<aff id="a1"><label>1</label>Biological Science, Institute for Eye Research, UNSW Sydney, NSW, Australia</aff>
			<aff id="a2	"><label>2</label>The School of Optometry and Vision Science, University of New South Wales, Kensington, NSW, Australia</aff>
			<pub-date pub-type="collection">
				<month>08</month>
				<year>2008</year>
			</pub-date>
			<pub-date pub-type="epub">
				<day>25</day>
				<month>07</month>
				<year>2008</year>
			</pub-date>			
			<volume>S2</volume>
			<issue>01</issue>
			<fpage>325</fpage>
			<lpage>326</lpage>
			<history>
			<date date-type="received">
			     <day>05</day>
				 <month>07</month>
				 <year>2008</year>
			</date>
			<date date-type="accepted">
			      <day>20</day>
				  <month>07</month>
				  <year>2008</year>
			</date>
			</history>		
			<permissions>
			 <copyright-statement>Copyright: &copy; Z Zhao et al. </copyright-statement>
        <copyright-year>2008</copyright-year>
        <license license-type="open-access">
          <p>This is an open-access article distributed under the terms of the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.</p>
        </license>
      </permissions>	
	  <abstract>
	  <sec>
	  <title>Purpose</title>			
			<p>To identify the proteins deposited on silicon hydrogel contact lenses during wear and analyze the effect of lens materials and multipurpose disinfecting solutions on protein deposition.</p>
			</sec>
			<sec>
			<title>Methods</title>				
			<p>Four contact lenses Lotrafilcon B (CIBA Vision), Balafilcon A (Bausch &amp; Lomb), Galyfilcon A (Johnson &amp; Johnson Vision Care, J&amp;J) and Senofilcon A (J&amp;J) and four disinfecting solutions ClearCare (CIBA Vision), Opti-Free Express (Alcon), Opti-Free RepleniSH (Alcon), and AQuify (CIBA Vision) were used. Worn contact lenses (daily wear, 1 month) were collected from subjects and the protein deposits on the lenses were extracted using a buffer containing 4 M urea and 0.1% SDS. After desalting and concentrating, the samples were digested with trypsin and analyzed by liquid chromatography-mass spectrometry (LC-MS). Peak lists were generated by MassLynx (version 4.0 SP1, Micromass) using the Mass Measure program and submitted to the database search program Mascot. Protein identification was based on matches of detected peptides to reference peptides in NCBI database. Ions scores &gt; 50 indicated identity or extensive homology (P &lt; 0.05).</p>
			</sec>
			<sec>
			<title>Results</title>
			<p>A total of 68 different proteins were identified from the samples. The deposit from Acuvue Oasys with AQuify had the highest number of protein species (31) while the samples from O2 Optix with ClearCare and Acuvue Advance with Opti-Free Express had the lowest number (4). The most frequently detected proteins were lysozyme (15 kDa), lipocalin (19 kDa) and proline rich protein 4 (15 kDa). Three other abundant tear proteins, lactoferrin (69 kDa), IgA (50 kDa) and albumin (69 kDa), were detected in a lower frequency. Immunogloblin family of proteins were frequently extracted from worn Acuvue Oasys lenses. Keratin was also frequently extracted, probably due to continued touching of lenses by hands during insertion and removal.</p>
			</sec>
			<sec>
			<title>Conclusions</title>
			<p>Contact lenses absorb/adsorb proteins from tear film and other sources during wear.</p>
			</sec>
	</abstract>
	<custom-meta-wrap>
				<custom-meta>
					<meta-name>citation</meta-name>
					<meta-value>Z Zhao, NA Carnt, Y Aliwarga, X Wei, MDP Willcox (2008) Identity of Proteins Extracted from Worn Silicone Hydrogel Contact Lenses.</meta-value>
				</custom-meta>
			</custom-meta-wrap>
		</article-meta>
	</front>		
   </article>
